Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015551.1 Corchorus capsularis cultivar CVL-1 contig15572, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35711

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
276--305
11
2.6
11
94
5
51
26
0
0
73
0.84
273--302
14
2.1
14
93
0
51
23
0
0
76
0.78
11851--11915
13
4.8
13
70
18
53
18
13
9
58
1.61
20081--20123
22
2.0
22
81
9
52
4
18
6
69
1.29
24116--24181
33
2.0
33
84
0
87
28
16
13
40
1.87
27722--27764
18
2.4
18
84
0
50
23
20
23
32
1.98
29313--29372
27
2.2
27
93
0
102
41
3
6
48
1.46
29914--29972
30
2.0
30
86
0
82
28
25
18
27
1.98
33819--33897
38
2.1
38
97
0
149
49
13
13
22
1.78

Tables:   1

The End!