Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015558.1 Corchorus capsularis cultivar CVL-1 contig15579, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15899

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2752--2820
27
2.6
27
81
4
77
44
21
15
17
1.86
3711--3754
23
1.9
23
90
0
70
15
20
13
50
1.78
4471--4512
22
2.0
22
85
4
59
73
0
23
2
0.94
5414--5593
96
1.8
97
90
3
290
30
13
20
35
1.92
6783--7054
26
10.4
25
69
20
130
19
21
2
55
1.56
6846--6928
30
2.9
30
81
13
86
22
19
0
57
1.40
7151--7475
22
14.6
22
74
15
276
21
21
4
52
1.66
7151--7399
44
5.7
44
89
3
396
22
21
4
51
1.66
7151--7481
88
4.0
87
87
9
455
21
22
5
51
1.67
7486--7587
35
2.8
35
75
13
107
25
17
2
53
1.57
7497--7587
39
2.4
39
80
10
109
23
16
2
58
1.49
7607--7688
20
4.2
19
79
11
69
20
23
4
51
1.67
11693--11764
27
2.7
26
87
10
101
45
27
11
15
1.80
13345--13392
6
7.8
6
95
2
78
37
12
0
50
1.41
13633--13695
21
3.0
20
69
15
56
50
11
1
36
1.47
13624--13704
42
2.0
40
90
4
126
51
8
1
38
1.41
14003--14083
42
2.0
40
92
4
135
53
8
1
37
1.40
13386--14134
379
2.0
370
96
2
1390
39
12
5
42
1.67
14900--14969
36
1.9
36
91
5
115
60
5
10
24
1.51

Tables:   1

The End!