Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015560.1 Corchorus capsularis cultivar CVL-1 contig15581, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17861

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39--145
34
3.2
33
89
3
153
15
35
35
13
1.87
5599--5627
14
2.0
15
93
6
51
27
3
0
68
1.05
5651--5944
86
3.6
83
84
12
401
34
16
6
43
1.73
5651--5944
161
1.8
161
91
2
493
34
16
6
43
1.73
6666--6702
16
2.3
16
90
0
56
5
29
13
51
1.63
7179--8053
35
25.2
35
94
1
721
33
20
18
27
1.96
7596--8045
70
6.5
70
96
0
814
31
23
16
28
1.96
17725--17753
14
2.0
15
93
6
51
27
3
0
68
1.05

Tables:   1

The End!