Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015568.1 Corchorus capsularis cultivar CVL-1 contig15589, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11017

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1467--1618
75
2.0
75
100
0
304
38
14
18
28
1.90
2058--2129
2
38.5
2
74
22
68
52
2
0
44
1.15
2059--2129
19
3.6
18
78
19
72
53
2
0
43
1.15
4990--5172
53
3.4
51
83
11
190
39
27
13
20
1.89
5127--5228
30
3.4
28
74
15
80
42
28
9
19
1.83
6079--6117
19
2.1
19
90
9
62
38
28
5
28
1.78

Tables:   1

The End!