Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015569.1 Corchorus capsularis cultivar CVL-1 contig15590, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5700

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1123--1160
18
2.1
18
100
0
76
44
23
10
21
1.83
1698--1761
28
2.3
28
100
0
128
28
9
21
40
1.84
2719--2756
18
2.1
18
100
0
76
44
23
10
21
1.83
3356--3518
63
2.8
57
82
12
220
41
20
19
19
1.91
3478--3967
64
7.6
64
96
1
856
38
15
23
22
1.92
3478--3969
129
3.8
129
95
1
871
38
15
23
22
1.92

Tables:   1

The End!