Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015570.1 Corchorus capsularis cultivar CVL-1 contig15591, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6843

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
151--188
18
2.1
18
100
0
76
44
23
10
21
1.83
373--447
26
2.8
27
83
6
98
45
22
12
20
1.83
1435--1576
41
3.4
41
80
5
169
19
9
30
40
1.83
1412--1576
84
2.0
82
86
2
231
20
10
29
39
1.87
4598--4699
30
3.4
28
75
20
91
40
28
11
19
1.87
4514--4699
60
3.3
58
82
14
228
40
26
12
20
1.88

Tables:   1

The End!