Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015572.1 Corchorus capsularis cultivar CVL-1 contig15593, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29164

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
706--757
2
27.0
2
86
7
72
50
0
1
48
1.12
1925--1969
19
2.4
19
92
0
81
44
24
8
22
1.81
5191--5224
16
2.1
16
94
0
59
67
0
17
14
1.23
7273--7307
17
2.1
17
100
0
70
22
11
42
22
1.85
15523--15562
16
2.5
16
87
0
53
12
17
42
27
1.85
15972--16042
36
2.0
35
94
2
124
18
21
14
46
1.83

Tables:   1

The End!