Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015574.1 Corchorus capsularis cultivar CVL-1 contig15595, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28497

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6034--6058
13
1.9
13
100
0
50
80
0
0
20
0.72
8961--9535
35
16.7
35
84
5
724
38
11
18
32
1.86
9052--9116
31
2.2
28
82
12
78
36
12
18
32
1.88
8959--9535
136
4.2
136
90
3
843
37
11
18
32
1.86
11185--11226
21
2.0
20
90
4
66
23
45
0
30
1.53
12717--12854
73
1.9
74
93
1
242
42
3
12
41
1.60
12717--12825
24
4.5
24
72
15
98
44
2
11
42
1.54
12784--12835
24
2.2
24
85
0
68
51
0
11
36
1.38

Tables:   1

The End!