Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015579.1 Corchorus capsularis cultivar CVL-1 contig15600, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1767

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
401--440
22
1.9
22
85
10
57
45
10
15
30
1.78
644--677
15
2.3
15
89
0
50
11
14
44
29
1.81
688--760
16
4.6
16
79
6
85
8
24
35
31
1.85
688--775
32
2.8
32
80
3
106
7
25
35
31
1.85
1574--1710
16
8.6
16
81
9
154
8
22
37
32
1.83
1592--1710
7
14.9
8
69
24
74
8
23
37
30
1.84
1574--1710
48
2.9
47
82
8
170
8
22
37
32
1.83

Tables:   1

The End!