Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015580.1 Corchorus capsularis cultivar CVL-1 contig15601, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64365

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1262--1294
2
16.5
2
93
0
57
45
0
0
54
0.99
3067--3118
26
2.0
26
100
0
104
53
23
19
3
1.61
5410--5497
42
2.1
42
97
0
167
42
10
22
25
1.85
14020--14636
314
2.0
314
92
1
1022
32
24
15
27
1.95
22088--22123
19
1.9
18
88
5
54
41
2
22
33
1.68
30038--30073
19
1.9
18
88
5
54
41
2
22
33
1.68
39385--39432
19
2.7
18
78
18
55
18
8
14
58
1.61
51148--51206
30
2.0
30
86
6
84
30
15
30
23
1.95
56529--56577
21
2.3
21
85
0
62
10
32
28
28
1.90

Tables:   1

The End!