Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015587.1 Corchorus capsularis cultivar CVL-1 contig15608, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2932

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
654--684
15
2.1
15
93
0
53
19
16
0
64
1.29
639--684
24
1.9
24
86
0
65
17
17
2
63
1.42
767--842
25
3.0
25
96
0
134
25
19
0
55
1.43
803--908
44
2.5
43
82
11
121
23
25
2
48
1.65
1286--1740
54
8.2
55
81
12
403
25
17
6
49
1.71
1397--1429
8
4.1
8
96
0
57
24
21
12
42
1.86
1334--1483
70
2.1
70
93
0
264
24
17
8
50
1.74
1588--1661
21
3.3
21
69
20
60
25
18
6
48
1.73
1523--1740
100
2.2
101
95
2
395
27
16
5
50
1.67
2390--2841
51
8.9
50
75
6
322
37
15
6
40
1.73
2402--2875
102
4.7
101
88
4
589
37
15
6
40
1.73
2402--2872
203
2.3
201
86
4
622
37
15
6
40
1.73

Tables:   1

The End!