Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015592.1 Corchorus capsularis cultivar CVL-1 contig15613, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22094

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4791--4840
19
2.7
18
75
3
55
28
2
34
36
1.69
5808--5837
6
5.0
6
100
0
60
16
33
0
50
1.46
6812--6840
13
2.1
14
93
6
51
0
17
0
82
0.66
12105--12147
11
3.9
11
91
8
70
30
4
18
46
1.69
21143--21423
21
13.5
21
69
16
117
19
20
7
52
1.70
21256--21389
22
6.0
22
79
11
130
21
20
4
52
1.64
21240--21274
16
2.2
16
94
0
61
20
17
8
54
1.68
21235--21373
45
3.0
46
83
11
135
20
20
5
54
1.62
21414--21492
35
2.3
35
84
0
95
21
21
8
48
1.77
21484--21527
21
2.1
21
87
4
63
15
20
2
61
1.45
21649--21714
31
2.1
31
91
8
107
25
18
6
50
1.70
21724--21902
47
3.5
53
81
12
152
22
17
10
49
1.77
21779--21857
26
3.2
26
64
29
73
24
16
8
50
1.73
21746--21905
47
3.4
47
95
0
277
23
20
9
46
1.79

Tables:   1

The End!