Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015595.1 Corchorus capsularis cultivar CVL-1 contig15616, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36831

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1140--1246
39
2.8
39
87
4
146
34
17
15
31
1.92
6406--6475
35
2.0
35
86
5
97
31
10
7
51
1.62
12997--13145
74
2.0
74
92
0
244
24
9
20
45
1.80
13223--13262
20
2.0
20
85
4
55
25
5
22
47
1.71
16187--16214
12
2.3
12
100
0
56
25
42
21
10
1.85
16187--16272
42
2.0
42
86
4
120
24
43
23
9
1.83
18643--18747
33
3.2
32
78
5
120
25
9
19
45
1.80
18696--18781
33
2.6
34
83
3
95
29
8
18
44
1.78
18763--18836
33
2.2
33
87
0
121
33
9
14
41
1.79
18763--18848
33
2.6
33
83
0
100
30
9
18
41
1.82
20678--20732
23
2.4
23
93
6
94
21
41
29
7
1.80
20762--20826
30
2.2
30
91
0
103
21
43
26
9
1.82

Tables:   1

The End!