Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015597.1 Corchorus capsularis cultivar CVL-1 contig15618, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14039

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
851--880
14
2.1
14
100
0
60
56
10
6
26
1.57
3001--3030
13
2.4
13
94
5
53
13
6
6
73
1.24
3646--3693
21
2.4
19
77
12
51
22
2
12
62
1.40
3965--3997
16
2.1
16
100
0
66
30
6
30
33
1.82
5286--5321
19
1.9
18
88
5
54
41
5
22
30
1.76
5842--5872
15
2.1
15
93
0
53
19
16
0
64
1.29
5827--5872
24
1.9
24
86
0
65
17
17
2
63
1.42
6069--6114
14
3.3
14
87
0
65
17
15
4
63
1.47
6069--6125
7
8.1
7
76
7
53
17
17
3
61
1.48
6072--6130
21
2.8
20
82
5
64
20
16
5
57
1.58
6361--6445
32
2.6
32
90
3
125
21
20
4
54
1.63
6534--6800
38
7.1
38
94
2
414
25
14
7
52
1.67
7605--7775
51
3.3
50
89
4
234
39
17
5
36
1.74
7605--7773
52
3.3
52
88
1
250
39
17
5
36
1.74
9180--9254
27
2.8
27
85
0
105
16
16
26
41
1.88

Tables:   1

The End!