Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015600.1 Corchorus capsularis cultivar CVL-1 contig15621, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9175

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6998--7037
13
2.9
14
81
11
55
37
5
15
42
1.68
7338--7394
12
4.6
13
85
10
84
71
10
0
17
1.12
7664--7692
13
2.2
13
100
0
58
34
0
20
44
1.52
7721--7761
9
4.9
9
88
11
61
75
0
12
12
1.05
7724--7766
8
5.5
8
89
10
63
79
0
11
9
0.95
9081--9158
22
3.4
22
72
10
84
29
28
20
21
1.98
9104--9175
22
3.0
25
70
12
78
27
22
19
30
1.98
9077--9175
47
2.1
47
96
0
180
31
23
19
26
1.98
9094--9167
22
3.2
22
70
10
76
31
22
17
28
1.97

Tables:   1

The End!