Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015601.1 Corchorus capsularis cultivar CVL-1 contig15622, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14086

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
871--904
9
3.7
9
96
4
59
14
0
0
85
0.60
872--904
10
3.4
10
91
4
50
12
0
0
87
0.53
11665--11746
33
2.5
33
95
0
146
42
18
9
29
1.82
11732--11828
33
2.9
33
82
0
122
44
20
9
25
1.81
13307--13413
33
3.2
32
86
5
126
8
28
40
22
1.83

Tables:   1

The End!