Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015609.1 Corchorus capsularis cultivar CVL-1 contig15630, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12160

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3861--3903
19
2.4
18
82
14
54
65
4
23
6
1.37
4211--4300
29
3.0
30
79
12
103
26
25
21
26
1.99
5714--5919
112
1.8
111
95
1
376
45
9
20
24
1.81
5808--5842
18
1.9
18
100
0
70
68
5
20
5
1.31
8877--9000
40
3.2
40
60
17
96
50
0
12
37
1.41
8860--9098
78
3.2
77
91
7
368
50
0
12
36
1.44
8944--9098
70
2.2
70
90
2
240
50
0
12
36
1.44

Tables:   1

The End!