Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015611.1 Corchorus capsularis cultivar CVL-1 contig15632, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22771

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
150--584
121
3.6
120
76
18
463
35
9
3
51
1.52
271--624
122
3.0
115
72
21
350
33
9
5
51
1.57
1368--1397
2
15.0
2
100
0
60
50
0
0
50
1.00
3435--3465
16
2.0
16
93
6
55
0
16
0
83
0.64
3980--4010
3
10.7
3
93
6
55
29
0
0
70
0.87
8193--8225
15
2.2
15
94
0
57
27
15
3
54
1.55
10298--10328
7
4.4
7
91
0
53
45
0
0
54
0.99
12158--12208
22
2.3
21
78
15
59
41
13
1
43
1.55
12273--12324
20
2.5
20
81
12
52
59
17
11
11
1.60
20350--20470
60
2.0
61
93
1
208
12
14
18
54
1.71

Tables:   1

The End!