Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015615.1 Corchorus capsularis cultivar CVL-1 contig15636, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31684

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
371--613
53
4.5
54
83
6
262
46
9
18
26
1.79
376--577
105
1.9
105
84
4
273
47
9
17
25
1.78
617--692
22
3.9
21
71
26
76
55
1
25
18
1.50
623--745
36
3.7
32
72
21
83
53
2
26
17
1.56
612--718
36
3.0
36
92
0
169
57
1
24
16
1.50
612--773
72
2.3
70
79
12
168
54
1
24
18
1.53
695--748
16
3.4
16
82
10
74
53
3
25
16
1.59
645--748
36
3.2
30
81
15
102
55
2
25
16
1.54
681--740
16
3.9
15
77
14
61
55
1
28
15
1.50
902--942
9
4.6
9
82
11
57
58
0
29
12
1.34
914--1094
76
2.4
76
78
8
188
49
5
21
23
1.70
4931--5207
153
1.8
152
92
5
470
31
16
22
28
1.96
6778--6809
11
2.8
12
86
13
50
34
0
18
46
1.49
7427--7461
17
2.1
17
94
0
61
11
8
17
62
1.52
11751--11778
11
2.5
11
100
0
56
21
39
17
21
1.93
12512--12550
16
2.4
16
86
0
51
12
5
20
61
1.50
15197--15230
8
4.1
8
85
7
50
23
2
14
58
1.50
17458--17489
11
2.8
12
86
13
50
34
0
18
46
1.49
18107--18141
17
2.1
17
94
0
61
11
8
17
62
1.52
26802--26832
5
6.4
5
92
7
55
80
0
0
19
0.71

Tables:   1

The End!