Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015624.1 Corchorus capsularis cultivar CVL-1 contig15645, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19876

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1047--1075
3
9.7
3
100
0
58
65
0
0
34
0.93
9173--9206
16
2.1
16
100
0
68
58
11
5
23
1.55
15358--15387
6
5.0
6
91
0
51
20
33
30
16
1.94
15672--15710
6
6.5
6
96
0
69
64
15
17
2
1.41
16556--16884
139
2.4
139
90
4
513
37
9
10
42
1.72
17169--17560
138
2.8
139
85
5
504
35
11
9
43
1.73
18931--18964
16
2.1
16
94
0
59
14
20
17
47
1.83
19721--19851
64
2.1
63
94
1
226
16
21
16
45
1.85

Tables:   1

The End!