Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015630.1 Corchorus capsularis cultivar CVL-1 contig15651, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62331

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12325--12380
25
2.2
26
81
6
71
48
23
19
8
1.77
12529--12582
28
1.9
28
85
7
74
42
22
12
22
1.87
12838--12924
24
3.6
24
74
0
84
37
27
16
18
1.92
25205--25274
35
2.0
35
100
0
140
31
11
5
51
1.61
39123--39163
19
2.2
19
95
0
73
39
2
51
7
1.43
40409--40500
46
2.0
46
100
0
184
41
8
4
45
1.55
43206--43283
21
3.6
22
79
5
79
43
8
16
30
1.79
48362--49045
49
14.0
49
87
0
884
24
31
13
30
1.93
59311--59687
60
6.2
60
94
0
601
33
18
15
32
1.92

Tables:   1

The End!