Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015636.1 Corchorus capsularis cultivar CVL-1 contig15657, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10208

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29--79
15
3.5
14
75
17
50
58
1
33
5
1.33
512--539
6
4.7
6
100
0
56
17
32
35
14
1.90
963--994
6
5.3
6
100
0
64
0
50
15
34
1.45
1081--1111
2
15.5
2
100
0
62
48
0
0
51
1.00
5302--5346
22
2.1
22
83
4
56
24
33
6
35
1.82
5792--5831
15
2.6
16
75
25
50
52
0
0
47
1.00
5816--5860
21
2.1
21
87
0
63
57
4
2
35
1.31
5823--5867
21
2.1
21
95
0
81
53
8
6
31
1.58
5999--6099
33
3.1
33
85
2
132
12
30
40
15
1.85
6762--6797
2
18.5
2
94
5
65
50
0
0
50
1.00
6762--6809
20
2.5
19
86
10
62
45
4
0
50
1.21

Tables:   1

The End!