Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015637.1 Corchorus capsularis cultivar CVL-1 contig15658, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19727

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
433--468
17
2.1
17
90
10
56
77
13
5
2
1.05
1520--1602
41
2.0
41
100
0
166
31
9
16
42
1.81
2371--2423
14
4.1
14
74
18
60
49
15
5
30
1.67
4199--4235
1
37.0
1
100
0
74
0
0
0
100
0.00
9530--9653
64
1.9
64
96
3
232
20
9
24
45
1.81
12041--12090
24
2.1
24
81
7
57
48
6
24
22
1.73
18118--18146
2
14.5
2
100
0
58
51
0
0
48
1.00
19643--19691
19
2.8
16
87
12
62
51
0
0
48
1.00

Tables:   1

The End!