Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015638.1 Corchorus capsularis cultivar CVL-1 contig15659, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4805

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--199
44
4.5
44
89
6
303
15
14
23
45
1.84
3--199
87
2.2
88
91
6
312
15
14
23
45
1.84
211--390
58
3.1
58
89
4
276
17
22
17
43
1.88
545--720
97
1.8
95
79
10
205
11
29
22
35
1.90
1067--1420
126
2.8
126
92
0
564
16
26
26
30
1.96
3411--3475
26
2.5
26
87
5
87
16
13
38
30
1.88

Tables:   1

The End!