Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015639.1 Corchorus capsularis cultivar CVL-1 contig15660, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18576

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2322--2368
23
2.0
23
83
4
58
27
2
34
36
1.69
2406--3136
222
3.3
219
89
3
1064
36
19
7
36
1.80
3140--3229
28
3.0
30
77
21
91
68
0
15
15
1.21
3181--3268
11
7.5
11
69
25
56
67
3
11
18
1.36
3179--3219
19
2.2
19
86
0
55
73
0
14
12
1.11
3298--3401
45
2.3
45
90
6
174
61
2
25
9
1.41
4110--4142
2
16.5
2
100
0
66
48
0
0
51
1.00
4363--4390
2
14.0
2
100
0
56
50
0
0
50
1.00
4772--4826
25
2.3
22
84
12
65
21
7
18
52
1.69
4775--4825
22
2.2
25
82
10
63
23
7
17
50
1.72
16373--16428
15
3.6
15
71
17
51
25
10
26
37
1.88
16580--16641
16
3.9
16
77
8
63
8
9
30
51
1.63
16702--16733
16
2.1
15
94
5
55
0
18
37
43
1.51

Tables:   1

The End!