Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015640.1 Corchorus capsularis cultivar CVL-1 contig15661, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11459

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
139--176
2
19.0
2
100
0
76
50
0
0
50
1.00
4054--4141
25
3.6
24
73
20
76
50
1
0
48
1.08
4056--4166
27
4.1
27
79
9
93
51
0
0
47
1.06
4057--4141
2
46.5
2
73
17
69
49
1
0
49
1.08
4695--4740
16
2.9
16
90
0
74
30
13
30
26
1.93
5440--5466
6
4.5
6
100
0
54
55
14
0
29
1.40
5463--5497
13
2.7
13
95
0
61
65
8
8
17
1.44
5463--5503
13
3.2
12
86
10
55
65
9
7
17
1.44
6428--6452
10
2.5
10
100
0
50
24
8
20
48
1.76
7167--7235
29
2.4
29
97
0
129
40
14
14
30
1.86
11195--11285
33
2.7
33
79
6
103
24
42
26
6
1.78

Tables:   1

The End!