Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015653.1 Corchorus capsularis cultivar CVL-1 contig15674, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44350

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2810--2893
22
3.9
21
78
10
89
29
9
21
39
1.85
2791--2893
22
4.8
20
76
11
80
29
9
20
40
1.84
15303--15337
16
2.2
16
100
0
70
37
20
5
37
1.76
21335--21396
26
2.3
29
72
16
69
51
3
1
43
1.27
26081--26120
21
1.9
21
84
0
53
37
5
2
55
1.35
41936--41969
16
2.1
16
100
0
68
47
17
23
11
1.81
44196--44337
64
2.2
66
92
3
234
50
15
20
14
1.78

Tables:   1

The End!