Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015663.1 Corchorus capsularis cultivar CVL-1 contig15684, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16690

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2127--2181
18
3.1
18
89
0
83
40
16
27
16
1.89
3333--3524
28
7.0
27
84
8
248
5
35
41
17
1.72
3312--3524
81
2.6
81
89
2
309
5
37
39
17
1.74
3742--3773
2
16.0
2
100
0
64
50
0
0
50
1.00
9433--9472
17
2.4
17
86
0
53
40
32
5
22
1.76
9444--9539
16
5.8
17
79
6
99
32
30
12
25
1.92
9483--9546
32
2.0
32
87
0
92
28
31
18
21
1.97
11205--11381
55
3.2
55
76
9
216
33
17
18
29
1.94
12404--12462
29
2.1
29
80
3
66
28
33
11
25
1.91
14739--14775
16
2.4
16
95
4
67
45
5
5
43
1.49
14944--15033
45
2.0
45
93
4
155
32
20
23
24
1.98
14849--15603
315
2.4
316
89
4
1124
30
15
17
36
1.91
15406--15732
166
2.0
168
87
3
473
29
13
17
39
1.87

Tables:   1

The End!