Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015667.1 Corchorus capsularis cultivar CVL-1 contig15688, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22389

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1519--1543
13
1.9
13
100
0
50
56
4
40
0
1.18
2692--2766
31
2.4
31
77
0
87
20
32
22
25
1.98
2545--3068
194
2.7
194
78
7
458
29
20
19
30
1.97
3014--3264
130
1.9
131
95
0
450
35
23
11
29
1.91
6921--6959
10
3.9
10
89
0
60
43
20
5
30
1.73
6921--6959
20
2.0
20
100
0
78
43
20
5
30
1.73
7967--8009
12
3.5
12
93
6
77
25
23
16
34
1.95
8318--8387
29
2.5
28
83
6
79
64
17
8
10
1.48
17353--17477
22
5.5
22
75
16
87
37
7
18
36
1.78
17606--17680
18
3.9
18
78
7
69
38
10
12
38
1.77
18899--18923
13
1.9
13
100
0
50
40
12
8
40
1.72
19664--19693
1
30.0
1
100
0
60
100
0
0
0
0.00
21940--22159
118
1.9
118
93
1
379
35
6
22
35
1.80

Tables:   1

The End!