Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015671.1 Corchorus capsularis cultivar CVL-1 contig15692, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9034

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2299--2360
20
2.8
23
78
16
67
62
4
9
22
1.44
2556--2676
63
2.0
62
88
6
185
42
16
5
35
1.72
6308--6367
20
3.1
19
81
11
68
40
3
0
56
1.16
6312--6367
21
2.7
19
78
13
58
39
3
0
57
1.16
7104--7397
143
2.0
143
90
3
457
26
20
12
40
1.87
7940--8011
31
2.3
31
76
4
83
26
4
8
61
1.43
8486--8718
70
3.2
70
82
10
288
37
12
0
49
1.45
8486--8724
78
3.2
77
89
5
332
37
12
0
49
1.44

Tables:   1

The End!