Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015673.1 Corchorus capsularis cultivar CVL-1 contig15694, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7355

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
258--427
50
3.3
51
86
4
227
44
5
12
37
1.67
257--444
101
1.9
102
86
1
270
43
6
13
36
1.70
1245--1620
55
6.7
55
87
6
529
50
8
16
24
1.73
1278--1365
29
3.2
29
63
28
73
48
9
17
25
1.75
1402--1620
119
1.8
119
92
0
366
51
8
15
24
1.71
1577--1697
34
3.5
34
68
16
95
48
8
14
28
1.73
1565--1782
70
3.1
69
83
8
244
47
6
17
27
1.73
1905--1960
24
2.3
25
90
3
87
41
3
19
35
1.69
2119--2216
16
6.7
16
71
17
70
52
3
19
25
1.61
2150--2207
25
2.4
25
91
2
91
53
3
18
24
1.60
2191--2224
15
2.3
15
94
0
59
61
0
17
20
1.34
2194--2244
24
2.1
24
88
0
75
60
3
15
19
1.50
6272--6318
3
15.7
3
100
0
94
68
0
0
31
0.90
6455--6604
75
2.0
75
90
0
237
38
10
20
30
1.87
6974--7042
17
4.2
16
72
18
54
75
0
20
4
0.97

Tables:   1

The End!