Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015684.1 Corchorus capsularis cultivar CVL-1 contig15705, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9208

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2960--2998
12
3.4
11
86
10
51
84
0
12
2
0.72
2959--2992
13
2.6
13
90
0
59
85
0
11
2
0.71
2958--2998
13
3.5
11
90
9
55
82
0
14
2
0.76
3067--3121
26
2.2
26
86
3
76
38
7
10
43
1.68
3067--3115
14
3.7
14
78
13
59
42
8
10
38
1.68
3723--3769
21
2.1
23
84
7
62
51
8
10
29
1.66
5590--5645
29
1.9
29
85
0
76
25
21
23
30
1.99
5618--5713
35
2.8
34
80
1
102
23
21
17
36
1.95
5766--6143
36
10.6
36
71
11
249
17
15
29
37
1.90
5758--6143
72
5.4
72
75
9
290
17
15
29
37
1.91
5766--6143
107
3.5
106
80
5
337
17
15
29
37
1.90

Tables:   1

The End!