Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015690.1 Corchorus capsularis cultivar CVL-1 contig15711, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29298

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
438--471
16
2.2
16
89
5
52
29
2
8
58
1.43
11408--11457
20
2.5
20
80
3
64
64
0
0
36
0.94
13053--13092
1
40.0
1
94
0
71
97
2
0
0
0.17
13309--13386
39
2.0
39
92
0
129
53
15
14
16
1.73
26866--26917
19
2.7
20
84
3
61
34
11
5
48
1.63
27045--27069
10
2.5
10
100
0
50
0
20
40
40
1.52
27332--27387
25
2.3
24
81
12
69
53
0
1
44
1.11
27404--27513
5
21.8
5
95
0
193
20
0
1
77
0.86
27657--27691
18
2.0
18
88
5
54
5
14
34
45
1.68

Tables:   1

The End!