Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015692.1 Corchorus capsularis cultivar CVL-1 contig15713, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25887

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8--45
6
6.3
6
96
0
67
21
15
0
63
1.31
8660--8706
22
2.1
22
84
7
60
46
6
19
27
1.74
12668--12700
8
3.7
9
88
12
50
66
3
0
30
1.06
13253--13300
21
2.1
21
85
11
60
43
8
8
39
1.65
25196--25220
10
2.5
10
100
0
50
88
0
12
0
0.53

Tables:   1

The End!