Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015696.1 Corchorus capsularis cultivar CVL-1 contig15717, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38679

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3395--3566
86
2.0
85
96
1
317
22
22
23
31
1.98
3686--3722
2
19.0
2
94
5
67
48
0
0
51
1.00
6052--6113
30
2.0
31
93
3
108
30
29
8
32
1.86
17858--17884
13
2.1
13
100
0
54
44
14
0
40
1.46
28016--28058
22
2.0
22
86
9
61
30
6
30
32
1.84
29504--29545
13
3.4
13
80
12
61
71
9
0
19
1.13
29504--29552
24
2.1
23
96
3
89
73
10
0
16
1.09
29787--29848
31
1.9
33
83
6
83
45
30
6
17
1.74
31341--31375
2
17.5
2
100
0
70
51
0
0
48
1.00
31427--31887
167
2.8
164
83
6
595
29
14
16
39
1.88
32045--32077
17
1.9
17
93
0
57
39
0
9
51
1.34
36884--36964
38
2.1
38
88
4
119
14
7
19
58
1.60

Tables:   1

The End!