Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015698.1 Corchorus capsularis cultivar CVL-1 contig15719, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21875

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4172--4215
21
2.2
20
87
4
61
18
34
11
36
1.86
4428--4595
32
5.2
32
76
5
140
14
37
35
12
1.84
4538--4611
32
2.3
32
92
0
121
6
31
47
14
1.71
4763--4806
21
2.1
21
87
8
63
38
11
27
22
1.88
7060--7105
5
9.2
5
86
9
67
58
2
0
39
1.10
7728--7765
19
2.0
20
89
5
60
44
10
13
31
1.77
14222--14368
73
2.0
75
89
4
226
43
23
10
23
1.84
21261--21294
17
2.0
17
88
0
50
82
11
2
2
0.89
21252--21291
11
3.7
11
86
3
55
82
10
2
5
0.91

Tables:   1

The End!