Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015701.1 Corchorus capsularis cultivar CVL-1 contig15722, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44138

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41--77
2
18.5
2
100
0
74
51
0
0
48
1.00
6078--6107
2
15.0
2
100
0
60
50
0
0
50
1.00
6107--6135
2
14.5
2
100
0
58
51
0
48
0
1.00
6445--7069
315
2.0
315
92
0
1043
32
13
22
31
1.93
12762--12794
15
2.1
16
88
5
50
51
30
6
12
1.63
15667--15691
6
4.2
6
100
0
50
20
16
16
48
1.82
16710--16770
32
2.0
30
87
12
88
45
6
11
36
1.66
17461--17486
11
2.4
11
100
0
52
46
0
0
53
1.00
17457--17482
13
2.0
13
100
0
52
46
0
0
53
1.00
19173--19202
10
3.0
10
100
0
60
40
30
10
20
1.85
19756--19797
21
2.0
21
86
9
59
30
38
14
16
1.89
32723--32921
92
2.2
92
99
0
389
26
8
21
44
1.80
39343--39390
2
24.0
2
100
0
96
50
50
0
0
1.00
41755--41832
21
3.6
22
69
11
54
12
23
5
58
1.54
42767--42796
15
1.9
16
93
6
53
23
10
6
60
1.52

Tables:   1

The End!