Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015703.1 Corchorus capsularis cultivar CVL-1 contig15724, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13119

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
881--958
38
2.1
38
95
4
140
30
19
1
48
1.57
3753--3782
6
5.0
6
100
0
60
83
16
0
0
0.65
6625--6795
22
8.0
22
72
10
113
35
9
18
36
1.83
6849--7032
22
8.5
22
73
14
134
40
9
15
34
1.79
6889--6962
38
1.9
38
81
5
87
37
8
18
35
1.81
6929--7020
23
4.0
22
82
9
114
42
7
11
38
1.70
7019--7072
20
2.5
22
76
11
67
37
11
9
42
1.73
7125--7206
43
1.9
43
84
0
110
39
6
14
40
1.71
7119--7207
22
4.2
21
70
18
69
40
6
14
38
1.73
9597--9650
24
2.3
23
84
9
65
12
5
11
70
1.32

Tables:   1

The End!