Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015705.1 Corchorus capsularis cultivar CVL-1 contig15726, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46264

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4437--4500
29
2.2
29
91
0
101
40
18
9
31
1.83
5850--5890
11
3.8
11
81
15
50
36
0
2
60
1.10
12852--12991
72
1.9
72
100
0
280
52
12
12
22
1.73
13693--13725
17
1.9
17
93
0
57
6
27
12
54
1.60
19129--19153
13
1.9
13
100
0
50
28
8
16
48
1.74
19148--19396
123
2.0
124
96
0
455
28
14
17
39
1.89
33040--33121
34
2.3
35
91
8
123
29
18
8
43
1.79
33054--33121
34
2.0
34
100
0
136
32
20
5
41
1.76
35375--35424
24
2.1
24
84
0
64
34
32
8
26
1.85

Tables:   1

The End!