Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015706.1 Corchorus capsularis cultivar CVL-1 contig15727, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26857

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7186--7224
20
2.0
20
89
0
60
28
23
20
28
1.99
24179--24220
21
2.0
21
95
0
75
40
19
19
21
1.92
26601--26644
21
2.1
21
95
0
79
18
43
9
29
1.80
26715--26770
22
2.5
24
91
8
91
37
23
0
39
1.55
26800--26830
10
3.1
10
100
0
62
80
0
0
19
0.71
26800--26841
20
2.1
20
86
0
57
78
0
4
16
0.91

Tables:   1

The End!