Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015713.1 Corchorus capsularis cultivar CVL-1 contig15734, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26848

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
465--569
33
3.2
32
78
10
131
24
7
19
48
1.74
2726--2784
30
2.0
30
86
6
84
30
16
28
23
1.97
5195--5338
70
2.1
70
95
0
261
34
11
20
34
1.89
8727--8774
2
26.0
2
76
23
52
54
2
0
43
1.12
8714--8763
21
2.4
21
83
12
59
60
4
2
34
1.27
24104--24276
41
4.2
41
81
1
202
20
12
28
38
1.89
24069--24276
83
2.6
82
90
3
314
20
12
27
38
1.89
24715--24833
35
3.4
35
81
3
134
26
20
29
23
1.99

Tables:   1

The End!