Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015715.1 Corchorus capsularis cultivar CVL-1 contig15736, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9097

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
185--210
2
13.0
2
100
0
52
50
0
0
50
1.00
314--370
22
2.5
24
77
11
66
47
8
8
35
1.66
1341--1397
22
2.6
22
94
0
96
36
14
21
28
1.92
2139--2220
40
2.0
40
97
0
155
43
9
7
39
1.65
7829--7854
2
13.0
2
100
0
52
50
0
0
50
1.00
8036--8097
31
2.0
31
93
0
106
43
4
20
30
1.73
8178--8239
31
2.0
31
87
0
88
45
6
20
27
1.76
7972--8250
142
2.0
142
94
0
495
46
5
15
31
1.70
8823--8852
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!