Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015723.1 Corchorus capsularis cultivar CVL-1 contig15744, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5201

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
405--439
17
2.1
17
88
0
52
45
20
14
20
1.85
1245--1413
27
6.3
27
96
0
302
20
17
42
18
1.89
1870--1903
15
2.3
15
94
0
59
35
14
0
50
1.44
2303--2328
2
13.0
2
100
0
52
50
0
0
50
1.00
2927--2989
26
2.4
26
97
0
117
28
14
30
26
1.95
2995--3059
13
5.2
13
88
7
107
60
0
40
0
0.97
2996--3068
13
6.0
12
91
3
87
57
0
41
1
1.07
3766--3843
32
2.4
32
78
4
95
28
20
24
26
1.99

Tables:   1

The End!