Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015727.1 Corchorus capsularis cultivar CVL-1 contig15748, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19955

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7903--7971
26
2.7
25
79
4
75
13
10
1
75
1.11
8196--8247
23
2.3
23
83
12
63
30
21
11
36
1.89
8628--8674
7
6.9
7
81
13
53
4
6
2
87
0.74
8624--8677
8
6.6
8
80
19
51
7
5
1
85
0.81
8624--8673
20
2.5
20
83
9
66
6
6
2
86
0.79
9136--9174
11
3.7
11
90
6
55
51
30
10
7
1.64
9583--9627
23
2.0
23
100
0
90
4
17
11
66
1.38
12762--12797
19
1.9
18
88
5
54
41
2
22
33
1.68

Tables:   1

The End!