Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015728.1 Corchorus capsularis cultivar CVL-1 contig15749, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13685

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7348--7495
74
2.0
74
98
0
287
28
30
10
30
1.91
12093--12130
18
2.1
19
85
9
53
71
13
15
0
1.16
13346--13376
15
2.1
15
93
0
53
19
16
0
64
1.29
13332--13403
24
2.9
24
81
6
63
19
18
1
61
1.43
13453--13524
26
2.8
26
95
0
126
22
19
5
52
1.66
13477--13565
42
2.2
40
86
8
126
23
17
3
55
1.58
13503--13542
16
2.5
16
91
0
71
25
17
2
55
1.55
13520--13635
24
5.1
23
73
23
102
22
18
3
55
1.58
13563--13608
16
2.8
16
83
3
65
26
21
0
52
1.47
13415--13635
66
3.3
66
89
6
322
23
20
3
52
1.63
13550--13650
41
2.4
42
84
11
127
25
20
1
51
1.58
13616--13662
18
2.8
16
83
6
58
27
21
4
46
1.69

Tables:   1

The End!