Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015736.1 Corchorus capsularis cultivar CVL-1 contig15757, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18614

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
493--534
2
20.0
2
90
9
66
47
0
4
47
1.23
685--754
35
2.0
35
100
0
140
14
37
25
22
1.92
3085--3143
28
2.1
28
96
0
109
35
18
10
35
1.85
4815--4847
4
8.0
4
93
6
57
72
3
24
0
0.98
6286--6381
48
2.0
48
95
0
174
31
16
31
20
1.95
9446--9475
2
15.5
2
93
6
53
0
46
0
53
1.00
10724--10818
44
2.1
47
90
5
151
42
21
7
29
1.80
11249--11408
60
2.7
61
80
6
157
39
15
16
28
1.89
11450--11584
31
4.4
31
80
10
134
27
13
20
38
1.90
11450--11648
91
2.2
91
86
1
265
29
15
19
36
1.92
12008--12062
17
3.2
17
73
2
56
43
0
5
50
1.25

Tables:   1

The End!