Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015744.1 Corchorus capsularis cultivar CVL-1 contig15765, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15623

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4205--5136
22
42.3
22
66
12
227
37
15
8
37
1.78
5563--5620
30
1.9
31
85
3
82
48
1
17
32
1.57
8316--8365
24
2.2
24
92
7
86
32
18
10
40
1.83
9107--9132
2
13.0
2
100
0
52
50
0
0
50
1.00
10604--11206
305
2.0
303
93
1
1028
34
14
15
35
1.88
11213--11241
1
29.0
1
100
0
58
0
0
100
0
0.00
15402--15548
73
2.0
73
98
0
285
49
10
15
23
1.76

Tables:   1

The End!