Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015746.1 Corchorus capsularis cultivar CVL-1 contig15767, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57267

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--46
2
23.0
2
100
0
92
0
50
0
50
1.00
21296--21328
2
16.5
2
100
0
66
51
0
0
48
1.00
22224--22264
20
2.0
20
90
9
66
46
14
9
29
1.77
26725--27213
246
2.0
241
94
2
852
30
24
10
34
1.89
27857--27896
19
2.1
19
95
0
71
62
12
5
20
1.48
34408--34478
36
2.0
36
94
0
124
32
11
7
49
1.65
50930--51123
68
2.9
68
84
1
248
46
13
12
26
1.80
50930--51124
33
5.8
34
72
13
109
46
13
12
27
1.80
51363--51516
11
14.0
11
77
2
139
46
9
16
27
1.78
51363--51525
33
4.9
33
84
3
202
46
9
16
26
1.78
51534--51632
36
2.8
36
92
3
155
43
11
22
23
1.85
51534--51670
36
3.9
35
85
7
152
45
10
21
22
1.83
51669--51745
32
2.4
32
91
0
127
50
5
16
27
1.66

Tables:   1

The End!