Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015751.1 Corchorus capsularis cultivar CVL-1 contig15772, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42074

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
352--387
19
1.9
18
88
5
54
33
22
2
41
1.68
1282--1318
19
2.0
18
89
5
56
40
16
21
21
1.91
7326--7409
40
2.1
41
86
6
118
55
16
9
17
1.67
7824--10748
905
3.2
910
84
4
3797
30
19
16
34
1.93
28877--28925
21
2.3
21
78
0
53
20
10
4
65
1.39
30340--30431
26
3.5
26
89
2
132
17
15
40
27
1.89
30340--30430
13
7.0
13
70
25
68
17
15
40
26
1.89
30471--30525
23
2.4
23
84
0
65
25
18
34
21
1.96
30491--30535
23
2.0
23
81
0
54
24
20
35
20
1.96
34304--34328
11
2.3
11
100
0
50
16
0
24
60
1.36
38841--38882
21
2.0
21
95
0
75
19
30
33
16
1.94
38862--38954
33
2.8
33
81
3
107
20
37
30
11
1.88
40016--40046
5
6.4
5
92
7
55
80
0
0
19
0.71
40010--40046
15
2.6
14
87
8
56
81
0
0
18
0.70

Tables:   1

The End!