Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015752.1 Corchorus capsularis cultivar CVL-1 contig15773, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35353

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4336--4435
33
3.1
32
82
4
119
22
41
27
10
1.85
5328--5595
113
2.4
113
92
0
437
31
23
21
24
1.98
5562--5642
32
2.5
32
93
0
135
23
23
29
23
1.99
10152--10223
29
2.5
29
88
2
101
26
29
22
22
1.99
11126--11212
42
2.1
42
86
4
122
24
42
26
6
1.79
13985--14010
8
3.2
8
100
0
52
38
0
23
38
1.55
19923--19949
13
2.1
13
100
0
54
70
14
14
0
1.17
22296--22321
12
2.2
12
100
0
52
26
15
42
15
1.87
23298--23333
14
2.6
14
95
0
63
50
8
0
41
1.33
26354--26406
25
2.1
26
89
3
81
22
13
18
45
1.84
27411--27511
51
2.0
51
98
0
193
21
19
13
44
1.86
30059--30118
32
1.9
32
93
3
104
48
0
10
41
1.37
30597--30633
5
7.4
5
93
0
65
0
21
0
78
0.75
32211--32278
33
2.1
33
88
0
100
23
38
29
8
1.85
34800--34871
33
2.2
33
92
0
117
23
8
19
48
1.76
34890--34971
27
2.7
32
72
21
84
30
12
17
40
1.86

Tables:   1

The End!